Ok, after following this guide: https://forums.comodo.com/frequently_asked_questions_faq_for_comodo_firewall/tutorial_for_utorrent_with_comodo_firewall_3-t15677.0.html
word for word with the additional step for using a modem, I am still unconvinced that I have set it up properly considering every time I start a torrent the number of “intrusion” attempts blocked climbs higher and higher. I have the port forwarded and open properly with uTorrent. I can torrent fine but I am still not happy with the speeds and I think it may just be because I have incorrectly set up CIS so any help is appreciated.
Few screenshots:
Intrusion attempts-
http://i44.tinypic.com/j8zd7b.jpg
uTorrent Policy-
http://i40.tinypic.com/rmnpz8.jpg
If there is any extra information you would like, feel free to ask and I will happily answer.
List of a few programs I use: Avast! Professional Edition, Spybot Search & Destroy, CIS (obviously) are about the only security software I have that constantly runs. (Spybot S&D being TeaTimer the residential protection) Avast! is just an antivirus so theres no problem with that.
Any help is appreciated. Thanks in advance! 
I too have followed that thread. My settings are based upon Pandlouks info in the first post. I had numerous intrusion attempts (every 2-3 seconds), which significantly resided after I added 3 additional rules per bad frogger (see https://forums.comodo.com/firewall_help/firewall_blocking_certain_source_ips_every_3_to_4_seconds-t33170.0.html then check the link provided in EricJH’s post to see what Im talking about).
I am now having a new intrusion attempt every few seconds by a IP sharing my router, and I am trying to get to the bottom of it now.
My settings look a little different than you’re picture. I too am not thrilled with the speed of dl’s, but I have developed the patience of Job when it comes to things like that. My main concern is staying proteced and connected, and this has been the case thus far. There are sooo many things that could factor the speed issue I wouldn’t know what to tell you on that subject. There are speed tweak recommendations linked in the thread you are talking about, I studied them, and didn’t feel comfortable making those system changes, so I’ll be content with the slowly but surely dl’ing.
Besides, there are many more aspects of CIS to explore yet!