Pretty much a sum up of what we chatted Melih.
Disabling rules by ID (globally)
Disabling rules by ID per cPanel account or domain
Disabling rules by directory
Auto-update of rules, daily, weekly.
Changelog for each update, will help us target bugs too
Maybe at some point a rule editor, categorized rules.
And as mentioned above, a better integration with LSWS. Even tho I dont see any issues so far in our logs.