hi people, sorry for not keeping up . i got a bit busy,

i have quite a little story about the problem I'd mentioned.
that day i booted the computer again in from the avira rescue disk and scanned for malwares with the rename option on. it found hundreds of viruses and one Trojan horse which had created/downloaded all the viruses. i scanned with housecall after boot, i did this several times alternatively to get the system free from those malwares. the system was found to be infected with windows sality virus. more than 350 executables were corrupt.all applications had the virus code even CIS. however during this process of deletion of virus my CIS died. cmdagent was not running.
i thought going to safe mode might give me some insight and option and i tried to boot in safe mode, but it showed the same problem, it wont boot in safe mode. Then i opened msconfig tool and selected the computer to boot in safe mode. i restarted but the system wont boot, it said windows cant run in safe mode and would take me back to the OS choice menu, the bad part is that no matter what option i selected i'd be returned to that page again and again. the system wont boot in any mode. may be my mistake was to force the safe boot.

i inserted the windows xp disk and did a windows installation repair, but it was no use. it didnt work and windows wont start. so i reformatted(windows partition only), i didn't had much to lose so i did it... now im reinstalling everything again and the nightmare seems to have ended.(fingers crossed) however im still running a housecall online scan just to make sure no malware escaped hidden in any other drives.
i think its a good idea to keep your windows installation in a small partition, it could limit the growth of malwares and would prevent massive data loss in case you got in a situation with no way out but formatting.
the 2 things that really helped me were the Avira AntiVir Rescue System(burned on a cd)(thanks to omelet guy) :)and trend micros housecall, both work great.
these are a couple of very powerful tools to get a sick pc up and working again.
however *sigh* what i feel bad about the whole thing is that CIS missed the virus. Sality inst a very new virus. The realtime scanner didn't catch the malware when it got transferred to my pc from the phone i'd connectd it to. It makes me wonder would i still have to go with this pain had i been using Avira.
I thank everyone who reviewed my posts and once again im impressed with the forums prompt response system and the nice helping guys who hang here.

Sincere regards for your time and help.
